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PHARMA360 GUIDES · FOR INDEPENDENT PHARMACY OWNERS

Pharmacy audit documentation checklist

A pharmacy audit documentation checklist lists the records an auditor is likely to ask for, so they can be found quickly and match each claim as it was billed. The core items are prescription records with any documented clarifications, dispensing and claims history, signature or delivery records, purchase invoices from every supplier, and records of returns, credits and transfers. Your PBM contracts, provider manuals and any audit notice define exactly what applies to your pharmacy, so use them alongside this list.

General information for pharmacy owners, not legal advice. Deadlines and requirements are set by your PBM contract and audit notice; always check the notice.

Prescription records

  • The original prescription, whether hard copy, fax, phone order or electronic prescription.
  • Complete prescriber information as required for the claim.
  • Documented clarifications: what was clarified, with whom, when, and by which staff member.
  • Refill authorizations and the refill history for each prescription.
  • Directions that support the days’ supply that was billed.

Dispensing and claims records

  • Claims history showing the NDC, quantity, days’ supply and fill date for each claim.
  • Records of reversals, with the reason for each one.
  • The product selection (DAW) code used on each claim, and documentation supporting it where needed.
  • Records showing which product, manufacturer and package size was actually dispensed.

Proof of pickup or delivery

  • Signature logs or electronic signature records for pickups.
  • Delivery manifests or signed delivery records.
  • Shipping and tracking records for mailed prescriptions.

Purchase and inventory records

  • Invoices from every wholesaler and secondary supplier for the full audit period.
  • Credit memos and return records.
  • Records of transfers to or from other pharmacies.
  • Controlled substance records kept as the applicable requirements specify.

Pharmacy and staff records

On-site audits in particular may include questions about the pharmacy itself. Keep current licenses, permits and registrations, pharmacist and staff license information, and written policies and procedures where they can be produced quickly. Our guide on how to prepare for a PBM on-site audit covers the visit itself.

How to keep the checklist working

  1. Name one person responsible for records and audit readiness.
  2. File records so they can be found by prescription number and fill date.
  3. Check the record retention requirements in your contracts and the rules that apply in your state, and keep records at least that long.
  4. Spot-check a sample of recent claims on a regular schedule, using this checklist.
  5. Reconcile purchases against dispensing for high-cost and frequently audited drugs, as explained in what is NDC reconciliation.
  6. Fix gaps going forward. Never alter or backdate an existing record; if something needs correcting, add a dated note that explains the correction.

Frequently asked questions

How long should a pharmacy keep audit records?

Retention periods come from the laws that apply to your pharmacy and from your PBM and payer contracts, and they can differ. Check each source and keep records for the longest period that applies.

What records do PBM auditors ask for most often?

Requests commonly include prescription images, refill history, signature or delivery records and purchase invoices. The audit notice lists exactly what is required for each audit.

Can I add a missing signature or document after an audit notice arrives?

Do not create, alter or backdate records. If a record is missing, gather what genuinely exists, explain any gap factually, and get advice before responding.

Do audit records have to be on paper?

Paper and electronic records can both work if they are complete, legible and easy to retrieve, and meet the rules and contract terms that apply to your pharmacy.

Official sources

Talk to Pharma360

Want to know what an auditor would find before a notice arrives? Pharma360 runs mock audits and readiness reviews for independent pharmacies. See our audit readiness & mock audits service, call (267) 809-2396, or request a call back. Your first phone or Zoom consultation is free, one time. Philadelphia-based, serving independent pharmacies in all 50 states.

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